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multiple sequence alignment using clustal w algorithm  (DNASTAR)


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    DNASTAR multiple sequence alignment using clustal w algorithm
    Multiple Sequence Alignment Using Clustal W Algorithm, supplied by DNASTAR, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/product/sequence+alignment+clustal+w+algorithm/clustalw+program/pm29846851-66-16-22
    Average 90 stars, based on 1 article reviews
    multiple sequence alignment using clustal w algorithm - by Bioz Stars, 2026-09
    90/100 stars

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    Related Articles

    Software:

    Article Title: Molecular epidemiology and phylogenetic analysis of diverse bovine astroviruses associated with diarrhea in cattle and water buffalo calves in China
    Article Snippet: .. Pair distances of nucleotide sequences between bovine and water buffalo astroviruses, as well as the ORF1b/ORF2 junction, were analyzed using DNAstar software (Lasergene 7; MegAlign Program with the Clustal W sequence alignment algorithm). ..

    Article Title: Early diagnosis of novel SFTS bunyavirus infection by quantitative real-time RT-PCR assay.
    Article Snippet: Background: Severe fever with thrombocytopenia syndrome (SFTS) is an emerging infectious disease recently identified to be caused by a novel bunyavirus (SFTSV).. The clinical diagnosis is urgently needed to differentiate the disease from other infections.. Objective: To develop a sensitive quantitative real-time RT-PCR assay for rapid detection of SFTSV viral RNA and evaluate potential use for clinical diagnosis of SFTS.

    Article Title: A real-time PCR assay for accurate quantification of the individual members of the Altered Schaedler Flora microbiota in gnotobiotic mice
    Article Snippet: .. To that end, we manually designed new oligonucleotide primer sequences for each ASF species after using the Clustal W algorithm for multiple sequence alignment from the DNA Lasergene 11 Software package (DNASTAR Inc., Madison, WI) to align all 16S rRNA ASF gene sequences. ..

    Article Title: One-Step Reverse Transcription-Polymerase Chain Reaction for Ebola and Marburg Viruses
    Article Snippet: .. Nucleotide sequences of the N-protein-encoding segments of seven known EBOVs and MARVs were aligned using the CLUSTAL W multiple alignment algorithm (MegAlign program, Lasergene sequence analysis software; DNASTAR Inc., Madison, WI, USA) to identify conserved regions. .. Primers for each segment were designed using Primer Express software (Version 3.0; PE Applied Biosystems, Foster City, CA, USA).

    Sequencing:

    Article Title: Molecular epidemiology and phylogenetic analysis of diverse bovine astroviruses associated with diarrhea in cattle and water buffalo calves in China
    Article Snippet: .. Pair distances of nucleotide sequences between bovine and water buffalo astroviruses, as well as the ORF1b/ORF2 junction, were analyzed using DNAstar software (Lasergene 7; MegAlign Program with the Clustal W sequence alignment algorithm). ..

    Article Title: Early diagnosis of novel SFTS bunyavirus infection by quantitative real-time RT-PCR assay.
    Article Snippet: Background: Severe fever with thrombocytopenia syndrome (SFTS) is an emerging infectious disease recently identified to be caused by a novel bunyavirus (SFTSV).. The clinical diagnosis is urgently needed to differentiate the disease from other infections.. Objective: To develop a sensitive quantitative real-time RT-PCR assay for rapid detection of SFTSV viral RNA and evaluate potential use for clinical diagnosis of SFTS.

    Article Title: Recombinant avian leukosis viruses of subgroup J isolated from field infected commercial layer chickens with hemangioma and myeloid leukosis possess an insertion in the E element
    Article Snippet: Phylogenetic analysis was performed using MegAlign in the DNASTAR program (Madison, WI, USA). .. After sequence alignment using the Jotun Hein or Clustal W algorithm of MegAlign module provided in DNASTAR program. ..

    Article Title: A real-time PCR assay for accurate quantification of the individual members of the Altered Schaedler Flora microbiota in gnotobiotic mice
    Article Snippet: .. To that end, we manually designed new oligonucleotide primer sequences for each ASF species after using the Clustal W algorithm for multiple sequence alignment from the DNA Lasergene 11 Software package (DNASTAR Inc., Madison, WI) to align all 16S rRNA ASF gene sequences. ..

    Article Title: One-Step Reverse Transcription-Polymerase Chain Reaction for Ebola and Marburg Viruses
    Article Snippet: .. Nucleotide sequences of the N-protein-encoding segments of seven known EBOVs and MARVs were aligned using the CLUSTAL W multiple alignment algorithm (MegAlign program, Lasergene sequence analysis software; DNASTAR Inc., Madison, WI, USA) to identify conserved regions. .. Primers for each segment were designed using Primer Express software (Version 3.0; PE Applied Biosystems, Foster City, CA, USA).

    Virus:

    Article Title: Early diagnosis of novel SFTS bunyavirus infection by quantitative real-time RT-PCR assay.
    Article Snippet: Background: Severe fever with thrombocytopenia syndrome (SFTS) is an emerging infectious disease recently identified to be caused by a novel bunyavirus (SFTSV).. The clinical diagnosis is urgently needed to differentiate the disease from other infections.. Objective: To develop a sensitive quantitative real-time RT-PCR assay for rapid detection of SFTSV viral RNA and evaluate potential use for clinical diagnosis of SFTS.

    other:

    Article Title: Serpentirhabdias dubielzigin. sp. (Nematoda: Rhabdiasidae) from Captive-Bred Ball Pythons,Python regius(Serpentes: Pythonidae) in the United States
    Article Snippet: Serpentirhabdias dubielzigi n. sp. is described from Python regius from 2 separate locales in the United States.. Many nematodes were observed in the eye, mouth, and subcutaneous tissues of 3 clinically affected, captive-bred, and captive-reared ball pythons.. Although intact adult nematodes were not available for examination from the 2 Wisconsin, U.S.A., snakes, nematodes seen in histological sections from these cases and from the single Virginia, U.S.A., case were identical.

    Article Title: Sirtuin3 (SIRT3) gene molecular characterization and SNP detection in prolific and low prolific goat breeds.
    Article Snippet: 11 Sirtuin3 (SIRT3) is a member of the Sirtuin family of NAD-dependent deacetylase.. They 12 have evolved as a vital protein in preventing the activation of reactive oxygen species (ROS) in 13 oocytes.. A novel study on caprine SIRT3 was conducted, to characterize caprine SIRT3, to detect 14 potential polymorphisms in SIRT3 and to analyze their association with litter size in the two 15 indigenous goat breeds of India viz., the prolific Malabari and low prolific Attappady Black 16 goats.



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